OBO UBO - Open Bio Ontologies Upper Bio Ontology
An upper ontology for use with OBO Foundry ontologies
This resource should be regarded as incomplete - made available for demo purposes
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BFO
Transcribed from papers on BFO, SNAP and SPAN:
Enhancing the Gene Ontology using text mining and design
principles for formal ontologies: Jacob Kohler, Barry
Smith, Katherine Munn, Alexander Ruegg, Andre Skusa
Biodynamic Ontology: Applying BFO in the Biomedical
Domain Pierre GRENON, Barry SMITH and Louis
GOLDBERG. D. M. Pisanelli (ed.), Ontologies in Medicine,
Amsterdam: IOS Press, 2004, 20 38
Note: errors may have been made either transcribing these papers
to a computable format, or in the interpretation of these papers
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UBO-OBR
HIGHLY INCOMPLETE!!
This will eventually be an ontology of upper-level biological types
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UBO OBO Foundry Mappings
A collection of is_a
mappings linking the root types from various OBO and OBO Foundry
ontologies to their parent UBO type
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UBO
UBO = BFO + OBR + OBO Foundry Mappings. Incomplete
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The native format is OBO; the OWL file is automatically generated from the OBO. The OBO2OWL mapping is not finalised
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